Welcome to OGeek Q&A Community for programmer and developer-Open, Learning and Share
Welcome To Ask or Share your Answers For Others

Categories

0 votes
364 views
in Technique[技术] by (71.8m points)

out of memory - Tensorflow OOM on GPU

i'm training some Music Data on a LSTM-RNN in Tensorflow and encountered some Problem with GPU-Memory-Allocation which i don't understand: I encounter an OOM when there actually seems to be just about enough VRAM still available. Some background: I'm working on Ubuntu Gnome 16.04, using a GTX1060 6GB, Intel Xeon E3-1231V3 and 8GB RAM. So now first the part of the error-message which i can understand, in the and i will add the whole error message in the end again for anyone who might ask for it to help:

I tensorflow/core/common_runtime/bfc_allocator.cc:696] 8 Chunks of size 256 totalling 2.0KiB I tensorflow/core/common_runtime/bfc_allocator.cc:696] 1 Chunks of size 1280 totalling 1.2KiB I tensorflow/core/common_runtime/bfc_allocator.cc:696] 5 Chunks of size 44288 totalling 216.2KiB I tensorflow/core/common_runtime/bfc_allocator.cc:696] 5 Chunks of size 56064 totalling 273.8KiB I tensorflow/core/common_runtime/bfc_allocator.cc:696] 4 Chunks of size 154350080 totalling 588.80MiB I tensorflow/core/common_runtime/bfc_allocator.cc:696] 3 Chunks of size 813400064 totalling 2.27GiB I tensorflow/core/common_runtime/bfc_allocator.cc:696] 1 Chunks of size 1612612352 totalling 1.50GiB I tensorflow/core/common_runtime/bfc_allocator.cc:700] Sum Total of in-use chunks: 4.35GiB I tensorflow/core/common_runtime/bfc_allocator.cc:702] Stats:

Limit: 5484118016

InUse: 4670717952

MaxInUse: 5484118016

NumAllocs: 29

MaxAllocSize: 1612612352

W tensorflow/core/common_runtime/bfc_allocator.cc:274] *********************___________*__***************************************************xxxxxxxxxxxxxx W tensorflow/core/common_runtime/bfc_allocator.cc:275] Ran out of memory trying to allocate 775.72MiB. See logs for memory state. W tensorflow/core/framework/op_kernel.cc:993] Resource exhausted: OOM when allocating tensor with shape[14525,14000]

So i can read that there is a maximum of 5484118016 bytes to be allocated, 4670717952 bytes are allready in use, and another 777.72MB = 775720000 bytes are to be allocated. 5484118016 bytes - 4670717952 bytes - 775720000 bytes = 37680064 bytes according to my calculator. So there should still be 37MB of free VRAM after allocating the space for the new Tensor he wants to push in there. This seems also to be quite legit to me, as Tensorflow would probably (i guess?) not try to allocate more VRAM than there is still available and just put the rest of the data on hold in RAM or something.

Now i guess there is just some big error in my thinking, but i would be quite gratefull if someone could explain to me, what this error is. The obvious solving-strategy to my problem is to just make my batches a bit smaller, having them each at around 1.5GB probably just is too big. Still i would love to know what the actual problem is there.

edit: I found something telling me to try:

config = tf.ConfigProto()
config.gpu_options.allocator_type = 'BFC'
with tf.Session(config = config) as s:

which still does not work, but as the tensorflow documentation lacks any explanation of what

 gpu_options.allocator_type = 'BFC'

would be, i would love to ask you guys.

Adding the rest of the error message for anyone interested:

Sorry for the long copy/paste, but maybe someone would need/want to see it,

Thank you so much in advance, Leon

(gputensorflow) leon@ljksUbuntu:~/Tensorflow$ python Netzwerk_v0.5.1_gamma.py 
I tensorflow/stream_executor/dso_loader.cc:135] successfully opened CUDA library libcublas.so.8.0 locally
I tensorflow/stream_executor/dso_loader.cc:135] successfully opened CUDA library libcudnn.so.5 locally
I tensorflow/stream_executor/dso_loader.cc:135] successfully opened CUDA library libcufft.so.8.0 locally
I tensorflow/stream_executor/dso_loader.cc:135] successfully opened CUDA library libcuda.so.1 locally
I tensorflow/stream_executor/dso_loader.cc:135] successfully opened CUDA library libcurand.so.8.0 locally
W tensorflow/core/platform/cpu_feature_guard.cc:45] The TensorFlow library wasn't compiled to use SSE3 instructions, but these are available on your machine and could speed up CPU computations.
W tensorflow/core/platform/cpu_feature_guard.cc:45] The TensorFlow library wasn't compiled to use SSE4.1 instructions, but these are available on your machine and could speed up CPU computations.
W tensorflow/core/platform/cpu_feature_guard.cc:45] The TensorFlow library wasn't compiled to use SSE4.2 instructions, but these are available on your machine and could speed up CPU computations.
W tensorflow/core/platform/cpu_feature_guard.cc:45] The TensorFlow library wasn't compiled to use AVX instructions, but these are available on your machine and could speed up CPU computations.
W tensorflow/core/platform/cpu_feature_guard.cc:45] The TensorFlow library wasn't compiled to use AVX2 instructions, but these are available on your machine and could speed up CPU computations.
W tensorflow/core/platform/cpu_feature_guard.cc:45] The TensorFlow library wasn't compiled to use FMA instructions, but these are available on your machine and could speed up CPU computations.
I tensorflow/stream_executor/cuda/cuda_gpu_executor.cc:910] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero
I tensorflow/core/common_runtime/gpu/gpu_device.cc:885] Found device 0 with properties: 
name: GeForce GTX 1060 6GB
major: 6 minor: 1 memoryClockRate (GHz) 1.7335
pciBusID 0000:01:00.0
Total memory: 5.93GiB
Free memory: 5.40GiB
I tensorflow/core/common_runtime/gpu/gpu_device.cc:906] DMA: 0 
I tensorflow/core/common_runtime/gpu/gpu_device.cc:916] 0:   Y 
I tensorflow/core/common_runtime/gpu/gpu_device.cc:975] Creating TensorFlow device (/gpu:0) -> (device: 0, name: GeForce GTX 1060 6GB, pci bus id: 0000:01:00.0)
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (256):   Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (512):   Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (1024):  Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (2048):  Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (4096):  Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (8192):  Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (16384):     Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (32768):     Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (65536):     Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (131072):    Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (262144):    Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (524288):    Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (1048576):   Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (2097152):   Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (4194304):   Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (8388608):   Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (16777216):  Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (33554432):  Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (67108864):  Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (134217728):     Total Chunks: 1, Chunks in use: 0 147.20MiB allocated for chunks. 147.20MiB client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:643] Bin (268435456):     Total Chunks: 1, Chunks in use: 0 628.52MiB allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/bfc_allocator.cc:660] Bin for 775.72MiB was 256.00MiB, Chunk State: 
I tensorflow/core/common_runtime/bfc_allocator.cc:666]   Size: 628.52MiB | Requested Size: 0B | in_use: 0, prev:   Size: 147.20MiB | Requested Size: 147.20MiB | in_use: 1, next:   Size: 54.8KiB | Requested Size: 54.7KiB | in_use: 1
I tensorflow/core/common_runtime/bfc_allocator.cc:678] Chunk at 0x10208000000 of size 1280
I tensorflow/core/common_runtime/bfc_allocator.cc:678] Chunk at 0x10208000500 of size 256
I tensorflow/core/common_runtime/bfc_allocator.cc:678] Chunk at 0x10208000600 of size 56064
I tensorflow/core/common_runtime/bfc_allocator.cc:678] Chunk at 0x1020800e100 of size 256
I tensorflow/core/common_runtime/bfc_allocator.cc:678] Chunk at 0x1020800e200 of size 44288
I tensorflow/core/common_runtime/bfc_allocator.cc:678] Chunk at 0x10208018f00 of size 256
I tensorflow/core/common_runtime/bfc_allocator.cc:678] Chunk at 0x10208019000 of size 256
I tensorflow/core/common_runtime/bfc_allocator.cc:678] Chunk at 0x10208019100 of size 813400064
I tensorflow/core/common_runtime/bfc_allocator.cc:678] Chunk at 0x102387d1100 of size 56064
I tensorflow/core/common_runtime/bfc_allocator.cc:678] Chunk at 0x102387dec00 of size

与恶龙缠斗过久,自身亦成为恶龙;凝视深渊过久,深渊将回以凝视…
Welcome To Ask or Share your Answers For Others

1 Reply

0 votes
by (71.8m points)

I resolve this issue by reducing batch_size=52 Only to reduce memory use is to reduce batch_size.

Batch_size depends on your gpu graphics card, size of VRAM, Cache memory etc.

Please prefer this Another Stack Overflow Link


与恶龙缠斗过久,自身亦成为恶龙;凝视深渊过久,深渊将回以凝视…
OGeek|极客中国-欢迎来到极客的世界,一个免费开放的程序员编程交流平台!开放,进步,分享!让技术改变生活,让极客改变未来! Welcome to OGeek Q&A Community for programmer and developer-Open, Learning and Share
Click Here to Ask a Question

...